dwi2response dhollander¶
Synopsis¶
dwi2response dhollander [ options ] input out_sfwm out_gm out_csf
- input: The input DWI
- out_sfwm: Output single-fibre WM response text file
- out_gm: Output GM response text file
- out_csf: Output CSF response text file
Description¶
Unsupervised estimation of WM, GM and CSF response functions. Does not require a T1 image (or segmentation thereof).
Options¶
Options specific to the ‘dhollander’ algorithm¶
- -erode Number of erosion passes to apply to initial (whole brain) mask. (default: 3)
- -fa FA threshold for crude WM versus GM-CSF separation. (default: 0.2)
- -sfwm Number of single-fibre WM voxels to select, as a percentage of refined WM. (default: 0.5 per cent)
- -gm Number of GM voxels to select, as a percentage of refined GM. (default: 2 per cent)
- -csf Number of CSF voxels to select, as a percentage of refined CSF. (default: 10 per cent)
Options common to all dwi2response algorithms¶
- -shell The b-value shell(s) to use in response function estimation (single value for single-shell response, comma-separated list for multi-shell response)
- -lmax The maximum harmonic degree(s) of response function estimation (single value for single-shell response, comma-separated list for multi-shell response)
- -mask Provide an initial mask for response voxel selection
- -voxels Output an image showing the final voxel selection(s)
- -grad Pass the diffusion gradient table in MRtrix format
- -fslgrad bvecs bvals Pass the diffusion gradient table in FSL bvecs/bvals format
Standard options¶
- -continue <TempDir> <LastFile> Continue the script from a previous execution; must provide the temporary directory path, and the name of the last successfully-generated file
- -force Force overwrite of output files if pre-existing
- -help Display help information for the script
- -nocleanup Do not delete temporary files during script, or temporary directory at script completion
- -nthreads number Use this number of threads in MRtrix multi-threaded applications (0 disables multi-threading)
- -tempdir /path/to/tmp/ Manually specify the path in which to generate the temporary directory
- -quiet Suppress all console output during script execution
- -verbose Display additional information for every command invoked
References¶
- If using ‘dhollander’ algorithm: Dhollander, T.; Raffelt, D. & Connelly, A. Unsupervised 3-tissue response function estimation from single-shell or multi-shell diffusion MR data without a co-registered T1 image. ISMRM Workshop on Breaking the Barriers of Diffusion MRI, 2016, 5
- If using ‘fa’ algorithm: Tournier, J.-D.; Calamante, F.; Gadian, D. G. & Connelly, A. Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution. NeuroImage, 2004, 23, 1176-1185
- If using ‘msmt_csd’ algorithm: Jeurissen, B.; Tournier, J.-D.; Dhollander, T.; Connelly, A. & Sijbers, J. Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data. NeuroImage, 2014, 103, 411-426
- If using ‘tax’ algorithm: Tax, C. M.; Jeurissen, B.; Vos, S. B.; Viergever, M. A. & Leemans, A. Recursive calibration of the fiber response function for spherical deconvolution of diffusion MRI data. NeuroImage, 2014, 86, 67-80
- If using ‘tournier’ algorithm: Tournier, J.-D.; Calamante, F. & Connelly, A. Determination of the appropriate b value and number of gradient directions for high-angular-resolution diffusion-weighted imaging. NMR Biomedicine, 2013, 26, 1775-1786
Author: Robert E. Smith (robert.smith@florey.edu.au) and Thijs Dhollander (thijs.dhollander@gmail.com)
Copyright: Copyright (c) 2008-2016 the MRtrix3 contributors
This Source Code Form is subject to the terms of the Mozilla Public License, v. 2.0. If a copy of the MPL was not distributed with this file, You can obtain one at http://mozilla.org/MPL/2.0/
MRtrix is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
For more details, see www.mrtrix.org
dwi2response fa¶
Synopsis¶
dwi2response fa [ options ] input output
- input: The input DWI
- output: The output response function text file
Description¶
Use the old FA-threshold heuristic for single-fibre voxel selection and response function estimation
Options¶
Options specific to the ‘fa’ algorithm¶
- -erode Number of brain mask erosion steps to apply prior to threshold (not used if mask is provided manually)
- -number The number of highest-FA voxels to use
- -threshold Apply a hard FA threshold, rather than selecting the top voxels
Options common to all dwi2response algorithms¶
- -shell The b-value shell(s) to use in response function estimation (single value for single-shell response, comma-separated list for multi-shell response)
- -lmax The maximum harmonic degree(s) of response function estimation (single value for single-shell response, comma-separated list for multi-shell response)
- -mask Provide an initial mask for response voxel selection
- -voxels Output an image showing the final voxel selection(s)
- -grad Pass the diffusion gradient table in MRtrix format
- -fslgrad bvecs bvals Pass the diffusion gradient table in FSL bvecs/bvals format
Standard options¶
- -continue <TempDir> <LastFile> Continue the script from a previous execution; must provide the temporary directory path, and the name of the last successfully-generated file
- -force Force overwrite of output files if pre-existing
- -help Display help information for the script
- -nocleanup Do not delete temporary files during script, or temporary directory at script completion
- -nthreads number Use this number of threads in MRtrix multi-threaded applications (0 disables multi-threading)
- -tempdir /path/to/tmp/ Manually specify the path in which to generate the temporary directory
- -quiet Suppress all console output during script execution
- -verbose Display additional information for every command invoked
References¶
- If using ‘dhollander’ algorithm: Dhollander, T.; Raffelt, D. & Connelly, A. Unsupervised 3-tissue response function estimation from single-shell or multi-shell diffusion MR data without a co-registered T1 image. ISMRM Workshop on Breaking the Barriers of Diffusion MRI, 2016, 5
- If using ‘fa’ algorithm: Tournier, J.-D.; Calamante, F.; Gadian, D. G. & Connelly, A. Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution. NeuroImage, 2004, 23, 1176-1185
- If using ‘msmt_csd’ algorithm: Jeurissen, B.; Tournier, J.-D.; Dhollander, T.; Connelly, A. & Sijbers, J. Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data. NeuroImage, 2014, 103, 411-426
- If using ‘tax’ algorithm: Tax, C. M.; Jeurissen, B.; Vos, S. B.; Viergever, M. A. & Leemans, A. Recursive calibration of the fiber response function for spherical deconvolution of diffusion MRI data. NeuroImage, 2014, 86, 67-80
- If using ‘tournier’ algorithm: Tournier, J.-D.; Calamante, F. & Connelly, A. Determination of the appropriate b value and number of gradient directions for high-angular-resolution diffusion-weighted imaging. NMR Biomedicine, 2013, 26, 1775-1786
Author: Robert E. Smith (robert.smith@florey.edu.au) and Thijs Dhollander (thijs.dhollander@gmail.com)
Copyright: Copyright (c) 2008-2016 the MRtrix3 contributors
This Source Code Form is subject to the terms of the Mozilla Public License, v. 2.0. If a copy of the MPL was not distributed with this file, You can obtain one at http://mozilla.org/MPL/2.0/
MRtrix is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
For more details, see www.mrtrix.org
dwi2response manual¶
Synopsis¶
dwi2response manual [ options ] input in_voxels output
- input: The input DWI
- in_voxels: Input voxel selection mask
- output: Output response function text file
Description¶
Derive a response function using an input mask image alone (i.e. pre-selected voxels)
Options¶
Options specific to the ‘manual’ algorithm¶
- -dirs Manually provide the fibre direction in each voxel (a tensor fit will be used otherwise)
Options common to all dwi2response algorithms¶
- -shell The b-value shell(s) to use in response function estimation (single value for single-shell response, comma-separated list for multi-shell response)
- -lmax The maximum harmonic degree(s) of response function estimation (single value for single-shell response, comma-separated list for multi-shell response)
- -mask Provide an initial mask for response voxel selection
- -voxels Output an image showing the final voxel selection(s)
- -grad Pass the diffusion gradient table in MRtrix format
- -fslgrad bvecs bvals Pass the diffusion gradient table in FSL bvecs/bvals format
Standard options¶
- -continue <TempDir> <LastFile> Continue the script from a previous execution; must provide the temporary directory path, and the name of the last successfully-generated file
- -force Force overwrite of output files if pre-existing
- -help Display help information for the script
- -nocleanup Do not delete temporary files during script, or temporary directory at script completion
- -nthreads number Use this number of threads in MRtrix multi-threaded applications (0 disables multi-threading)
- -tempdir /path/to/tmp/ Manually specify the path in which to generate the temporary directory
- -quiet Suppress all console output during script execution
- -verbose Display additional information for every command invoked
References¶
- If using ‘dhollander’ algorithm: Dhollander, T.; Raffelt, D. & Connelly, A. Unsupervised 3-tissue response function estimation from single-shell or multi-shell diffusion MR data without a co-registered T1 image. ISMRM Workshop on Breaking the Barriers of Diffusion MRI, 2016, 5
- If using ‘fa’ algorithm: Tournier, J.-D.; Calamante, F.; Gadian, D. G. & Connelly, A. Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution. NeuroImage, 2004, 23, 1176-1185
- If using ‘msmt_csd’ algorithm: Jeurissen, B.; Tournier, J.-D.; Dhollander, T.; Connelly, A. & Sijbers, J. Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data. NeuroImage, 2014, 103, 411-426
- If using ‘tax’ algorithm: Tax, C. M.; Jeurissen, B.; Vos, S. B.; Viergever, M. A. & Leemans, A. Recursive calibration of the fiber response function for spherical deconvolution of diffusion MRI data. NeuroImage, 2014, 86, 67-80
- If using ‘tournier’ algorithm: Tournier, J.-D.; Calamante, F. & Connelly, A. Determination of the appropriate b value and number of gradient directions for high-angular-resolution diffusion-weighted imaging. NMR Biomedicine, 2013, 26, 1775-1786
Author: Robert E. Smith (robert.smith@florey.edu.au) and Thijs Dhollander (thijs.dhollander@gmail.com)
Copyright: Copyright (c) 2008-2016 the MRtrix3 contributors
This Source Code Form is subject to the terms of the Mozilla Public License, v. 2.0. If a copy of the MPL was not distributed with this file, You can obtain one at http://mozilla.org/MPL/2.0/
MRtrix is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
For more details, see www.mrtrix.org
dwi2response msmt_5tt¶
Synopsis¶
dwi2response msmt_5tt [ options ] input in_5tt out_wm out_gm out_csf
- input: The input DWI
- in_5tt: Input co-registered 5TT image
- out_wm: Output WM response text file
- out_gm: Output GM response text file
- out_csf: Output CSF response text file
Description¶
Derive MSMT-CSD tissue response functions based on a co-registered five-tissue-type (5TT) image
Options¶
Options specific to the ‘msmt_5tt’ algorithm¶
- -dirs Manually provide the fibre direction in each voxel (a tensor fit will be used otherwise)
- -fa Upper fractional anisotropy threshold for GM and CSF voxel selection
- -pvf Partial volume fraction threshold for tissue voxel selection
- -wm_algo algorithm dwi2response algorithm to use for WM single-fibre voxel selection
Options common to all dwi2response algorithms¶
- -shell The b-value shell(s) to use in response function estimation (single value for single-shell response, comma-separated list for multi-shell response)
- -lmax The maximum harmonic degree(s) of response function estimation (single value for single-shell response, comma-separated list for multi-shell response)
- -mask Provide an initial mask for response voxel selection
- -voxels Output an image showing the final voxel selection(s)
- -grad Pass the diffusion gradient table in MRtrix format
- -fslgrad bvecs bvals Pass the diffusion gradient table in FSL bvecs/bvals format
Standard options¶
- -continue <TempDir> <LastFile> Continue the script from a previous execution; must provide the temporary directory path, and the name of the last successfully-generated file
- -force Force overwrite of output files if pre-existing
- -help Display help information for the script
- -nocleanup Do not delete temporary files during script, or temporary directory at script completion
- -nthreads number Use this number of threads in MRtrix multi-threaded applications (0 disables multi-threading)
- -tempdir /path/to/tmp/ Manually specify the path in which to generate the temporary directory
- -quiet Suppress all console output during script execution
- -verbose Display additional information for every command invoked
References¶
- If using ‘dhollander’ algorithm: Dhollander, T.; Raffelt, D. & Connelly, A. Unsupervised 3-tissue response function estimation from single-shell or multi-shell diffusion MR data without a co-registered T1 image. ISMRM Workshop on Breaking the Barriers of Diffusion MRI, 2016, 5
- If using ‘fa’ algorithm: Tournier, J.-D.; Calamante, F.; Gadian, D. G. & Connelly, A. Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution. NeuroImage, 2004, 23, 1176-1185
- If using ‘msmt_csd’ algorithm: Jeurissen, B.; Tournier, J.-D.; Dhollander, T.; Connelly, A. & Sijbers, J. Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data. NeuroImage, 2014, 103, 411-426
- If using ‘tax’ algorithm: Tax, C. M.; Jeurissen, B.; Vos, S. B.; Viergever, M. A. & Leemans, A. Recursive calibration of the fiber response function for spherical deconvolution of diffusion MRI data. NeuroImage, 2014, 86, 67-80
- If using ‘tournier’ algorithm: Tournier, J.-D.; Calamante, F. & Connelly, A. Determination of the appropriate b value and number of gradient directions for high-angular-resolution diffusion-weighted imaging. NMR Biomedicine, 2013, 26, 1775-1786
Author: Robert E. Smith (robert.smith@florey.edu.au) and Thijs Dhollander (thijs.dhollander@gmail.com)
Copyright: Copyright (c) 2008-2016 the MRtrix3 contributors
This Source Code Form is subject to the terms of the Mozilla Public License, v. 2.0. If a copy of the MPL was not distributed with this file, You can obtain one at http://mozilla.org/MPL/2.0/
MRtrix is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
For more details, see www.mrtrix.org
dwi2response tax¶
Synopsis¶
dwi2response tax [ options ] input output
- input: The input DWI
- output: The output response function text file
Description¶
Use the Tax et al. (2014) recursive calibration algorithm for single-fibre voxel selection and response function estimation
Options¶
Options specific to the ‘tax’ algorithm¶
- -peak_ratio Second-to-first-peak amplitude ratio threshold
- -max_iters Maximum number of iterations
- -convergence Percentile change in any RF coefficient required to continue iterating
Options common to all dwi2response algorithms¶
- -shell The b-value shell(s) to use in response function estimation (single value for single-shell response, comma-separated list for multi-shell response)
- -lmax The maximum harmonic degree(s) of response function estimation (single value for single-shell response, comma-separated list for multi-shell response)
- -mask Provide an initial mask for response voxel selection
- -voxels Output an image showing the final voxel selection(s)
- -grad Pass the diffusion gradient table in MRtrix format
- -fslgrad bvecs bvals Pass the diffusion gradient table in FSL bvecs/bvals format
Standard options¶
- -continue <TempDir> <LastFile> Continue the script from a previous execution; must provide the temporary directory path, and the name of the last successfully-generated file
- -force Force overwrite of output files if pre-existing
- -help Display help information for the script
- -nocleanup Do not delete temporary files during script, or temporary directory at script completion
- -nthreads number Use this number of threads in MRtrix multi-threaded applications (0 disables multi-threading)
- -tempdir /path/to/tmp/ Manually specify the path in which to generate the temporary directory
- -quiet Suppress all console output during script execution
- -verbose Display additional information for every command invoked
References¶
- If using ‘dhollander’ algorithm: Dhollander, T.; Raffelt, D. & Connelly, A. Unsupervised 3-tissue response function estimation from single-shell or multi-shell diffusion MR data without a co-registered T1 image. ISMRM Workshop on Breaking the Barriers of Diffusion MRI, 2016, 5
- If using ‘fa’ algorithm: Tournier, J.-D.; Calamante, F.; Gadian, D. G. & Connelly, A. Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution. NeuroImage, 2004, 23, 1176-1185
- If using ‘msmt_csd’ algorithm: Jeurissen, B.; Tournier, J.-D.; Dhollander, T.; Connelly, A. & Sijbers, J. Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data. NeuroImage, 2014, 103, 411-426
- If using ‘tax’ algorithm: Tax, C. M.; Jeurissen, B.; Vos, S. B.; Viergever, M. A. & Leemans, A. Recursive calibration of the fiber response function for spherical deconvolution of diffusion MRI data. NeuroImage, 2014, 86, 67-80
- If using ‘tournier’ algorithm: Tournier, J.-D.; Calamante, F. & Connelly, A. Determination of the appropriate b value and number of gradient directions for high-angular-resolution diffusion-weighted imaging. NMR Biomedicine, 2013, 26, 1775-1786
Author: Robert E. Smith (robert.smith@florey.edu.au) and Thijs Dhollander (thijs.dhollander@gmail.com)
Copyright: Copyright (c) 2008-2016 the MRtrix3 contributors
This Source Code Form is subject to the terms of the Mozilla Public License, v. 2.0. If a copy of the MPL was not distributed with this file, You can obtain one at http://mozilla.org/MPL/2.0/
MRtrix is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
For more details, see www.mrtrix.org
dwi2response tournier¶
Synopsis¶
dwi2response tournier [ options ] input output
- input: The input DWI
- output: The output response function text file
Description¶
Use the Tournier et al. (2013) iterative algorithm for single-fibre voxel selection and response function estimation
Options¶
Options specific to the ‘tournier’ algorithm¶
- -iter_voxels Number of single-fibre voxels to select when preparing for the next iteration
- -sf_voxels Number of single-fibre voxels to use when calculating response function
- -dilate Number of mask dilation steps to apply when deriving voxel mask to test in the next iteration
- -max_iters Maximum number of iterations
Options common to all dwi2response algorithms¶
- -shell The b-value shell(s) to use in response function estimation (single value for single-shell response, comma-separated list for multi-shell response)
- -lmax The maximum harmonic degree(s) of response function estimation (single value for single-shell response, comma-separated list for multi-shell response)
- -mask Provide an initial mask for response voxel selection
- -voxels Output an image showing the final voxel selection(s)
- -grad Pass the diffusion gradient table in MRtrix format
- -fslgrad bvecs bvals Pass the diffusion gradient table in FSL bvecs/bvals format
Standard options¶
- -continue <TempDir> <LastFile> Continue the script from a previous execution; must provide the temporary directory path, and the name of the last successfully-generated file
- -force Force overwrite of output files if pre-existing
- -help Display help information for the script
- -nocleanup Do not delete temporary files during script, or temporary directory at script completion
- -nthreads number Use this number of threads in MRtrix multi-threaded applications (0 disables multi-threading)
- -tempdir /path/to/tmp/ Manually specify the path in which to generate the temporary directory
- -quiet Suppress all console output during script execution
- -verbose Display additional information for every command invoked
References¶
- If using ‘dhollander’ algorithm: Dhollander, T.; Raffelt, D. & Connelly, A. Unsupervised 3-tissue response function estimation from single-shell or multi-shell diffusion MR data without a co-registered T1 image. ISMRM Workshop on Breaking the Barriers of Diffusion MRI, 2016, 5
- If using ‘fa’ algorithm: Tournier, J.-D.; Calamante, F.; Gadian, D. G. & Connelly, A. Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution. NeuroImage, 2004, 23, 1176-1185
- If using ‘msmt_csd’ algorithm: Jeurissen, B.; Tournier, J.-D.; Dhollander, T.; Connelly, A. & Sijbers, J. Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data. NeuroImage, 2014, 103, 411-426
- If using ‘tax’ algorithm: Tax, C. M.; Jeurissen, B.; Vos, S. B.; Viergever, M. A. & Leemans, A. Recursive calibration of the fiber response function for spherical deconvolution of diffusion MRI data. NeuroImage, 2014, 86, 67-80
- If using ‘tournier’ algorithm: Tournier, J.-D.; Calamante, F. & Connelly, A. Determination of the appropriate b value and number of gradient directions for high-angular-resolution diffusion-weighted imaging. NMR Biomedicine, 2013, 26, 1775-1786
Author: Robert E. Smith (robert.smith@florey.edu.au) and Thijs Dhollander (thijs.dhollander@gmail.com)
Copyright: Copyright (c) 2008-2016 the MRtrix3 contributors
This Source Code Form is subject to the terms of the Mozilla Public License, v. 2.0. If a copy of the MPL was not distributed with this file, You can obtain one at http://mozilla.org/MPL/2.0/
MRtrix is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
For more details, see www.mrtrix.org
dwi2response¶
Synopsis¶
dwi2response [ options ] algorithm ...
- algorithm: Select the algorithm to be used to derive the response function; additional details and options become available once an algorithm is nominated. Options are: dhollander, fa, manual, msmt_5tt, tax, tournier
Description¶
Estimate response function(s) for spherical deconvolution
Options¶
Standard options¶
- -continue <TempDir> <LastFile> Continue the script from a previous execution; must provide the temporary directory path, and the name of the last successfully-generated file
- -force Force overwrite of output files if pre-existing
- -help Display help information for the script
- -nocleanup Do not delete temporary files during script, or temporary directory at script completion
- -nthreads number Use this number of threads in MRtrix multi-threaded applications (0 disables multi-threading)
- -tempdir /path/to/tmp/ Manually specify the path in which to generate the temporary directory
- -quiet Suppress all console output during script execution
- -verbose Display additional information for every command invoked
References¶
- If using ‘dhollander’ algorithm: Dhollander, T.; Raffelt, D. & Connelly, A. Unsupervised 3-tissue response function estimation from single-shell or multi-shell diffusion MR data without a co-registered T1 image. ISMRM Workshop on Breaking the Barriers of Diffusion MRI, 2016, 5
- If using ‘fa’ algorithm: Tournier, J.-D.; Calamante, F.; Gadian, D. G. & Connelly, A. Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution. NeuroImage, 2004, 23, 1176-1185
- If using ‘msmt_csd’ algorithm: Jeurissen, B.; Tournier, J.-D.; Dhollander, T.; Connelly, A. & Sijbers, J. Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data. NeuroImage, 2014, 103, 411-426
- If using ‘tax’ algorithm: Tax, C. M.; Jeurissen, B.; Vos, S. B.; Viergever, M. A. & Leemans, A. Recursive calibration of the fiber response function for spherical deconvolution of diffusion MRI data. NeuroImage, 2014, 86, 67-80
- If using ‘tournier’ algorithm: Tournier, J.-D.; Calamante, F. & Connelly, A. Determination of the appropriate b value and number of gradient directions for high-angular-resolution diffusion-weighted imaging. NMR Biomedicine, 2013, 26, 1775-1786
Author: Robert E. Smith (robert.smith@florey.edu.au) and Thijs Dhollander (thijs.dhollander@gmail.com)
Copyright: Copyright (c) 2008-2016 the MRtrix3 contributors
This Source Code Form is subject to the terms of the Mozilla Public License, v. 2.0. If a copy of the MPL was not distributed with this file, You can obtain one at http://mozilla.org/MPL/2.0/
MRtrix is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
For more details, see www.mrtrix.org